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  5. Vocar.0113s0001.1

Vocar.0113s0001.1 (32888686)


Aliases : 32888686

Description : CASTOR/POLLUX/SYM8 ion channels [Interproscan].


Gene families : OG_01_0001814 (OrthoFinder) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0113s0001.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01000828.1_cds_GFH15274.1_9751 HaLaN_11471, GFH15274 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0007030 Golgi organization IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0042575 DNA polymerase complex IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043625 delta DNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR010420 CASTOR/POLLUX/SYM8_dom 731 796
No external refs found!