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  5. Vocar.0104s0007.1

Vocar.0104s0007.1 (32896538)


Aliases : 32896538

Description : PUL domain [Interproscan].


Gene families : OG_01_0002216 (OrthoFinder) Phylogenetic Tree(s): OG0002216_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0104s0007.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cre09.g389912 30781392 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder
EOD39562 No alias PLAA family ubiquitin binding domain; PUL domain; WD40... 0.01 OrthoFinder
PTI_01G02800.1 No alias PLAA family ubiquitin binding domain; PUL domain; WD40... 0.03 OrthoFinder
Sro495_g154490.1 Contig3243.g25629 Phospholipase A-2-activating protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
MF GO:0019905 syntaxin binding IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
MF GO:0031491 nucleosome binding IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0043044 ATP-dependent chromatin remodeling IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013535 PUL_dom 172 474
No external refs found!