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  5. Vocar.0097s0008.1

Vocar.0097s0008.1 (32888356)


Aliases : 32888356

Description : Zinc finger, CCCH-type [Interproscan].


Gene families : OG_01_0000404 (OrthoFinder) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0097s0008.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cre04.g231124 30791348 No description available 0.02 OrthoFinder
Cz05g00060.t1 No alias Zinc finger, CCCH-type [Interproscan]. 0.02 OrthoFinder
OT_18G00170.1 No alias E3 ligase, CCCH-type zinc finger; RNA-binding, Nab2-type... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006470 protein dephosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 278 302
IPR000571 Znf_CCCH 392 416
IPR000571 Znf_CCCH 335 360
No external refs found!