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  5. Vocar.0080s0004.1

Vocar.0080s0004.1 (32891574)


Aliases : 32891574

Description : gag-polypeptide of LTR copia-type [Interproscan].


Gene families : OG_01_0009783 (OrthoFinder) Phylogenetic Tree(s): OG0009783_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0080s0004.1
Cluster HCCA: Cluster_37


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
CC GO:0005666 RNA polymerase III complex IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!