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Aliases : 32899259
Description : Proteasome/cyclosome repeat; 26S proteasome non-ATPase regulatory subunit RPN1, C-terminal; RPN1/RPN2, N-terminal [Interproscan].
Gene families : OG_01_0002845 (OrthoFinder) Phylogenetic Tree(s): OG0002845_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0074s0017.1 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00020703.10 | tig00020703_g13111.t1 | Protein degradation.26S proteasome.regulatory... | 0.02 | OrthoFinder | |
| Cre16.g676197 | 30777418, RPN1 | Protein degradation.26S proteasome.regulatory... | 0.06 | OrthoFinder | |
| Cz12g21080.t1 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.02 | OrthoFinder | |
| Dusal.0089s00028.1 | 33198315 | Proteasome/cyclosome repeat; RPN1/RPN2, N-terminal... | 0.02 | OrthoFinder | |
| EOD19524 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.03 | OrthoFinder | |
| EOD21217 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.03 | OrthoFinder | |
| OT_09G01040.1 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.02 | OrthoFinder | |
| PTI_12G01960.1 | No alias | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.04 | OrthoFinder | |
| Sro142_g066400.1 | Contig226.g2689 | ATPase regulatory subunit 2 | 0.05 | OrthoFinder | |
| SymbC1.scaffold439.1 | 439.1 | Proteasome/cyclosome repeat;... | 0.02 | OrthoFinder | |
| TP05G01900.1 | No alias | RPN1/RPN2, N-terminal; 26S proteasome non-ATPase... | 0.03 | OrthoFinder | |
| Transcript_contig_56271 | 56271 | RPN1/RPN2, N-terminal; Proteasome/cyclosome repeat... | 0.02 | OrthoFinder | |
| XM_002500577.1 | MICPUN_90309, 90309 | 26S proteasome non-ATPase regulatory subunit RPN1,... | 0.02 | OrthoFinder | |
| lcl|LHPG02000016.1_cds_PRW33713.1_3354 | PRW33713 | 26S proteasome regulatory subunit | 0.03 | OrthoFinder | |
| lcl|VRMN01000012.1_cds_KAA8491649.1_5117 | KAA8491649 | 26S proteasome regulatory subunit RPN1 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003856 | 3-dehydroquinate synthase activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004749 | ribose phosphate diphosphokinase activity | IEP | Enrichment |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006606 | protein import into nucleus | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0006839 | mitochondrial transport | IEP | Enrichment |
| BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Enrichment |
| BP | GO:0008104 | protein localization | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Enrichment |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0015031 | protein transport | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0016197 | endosomal transport | IEP | Enrichment |
| BP | GO:0016482 | cytosolic transport | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Enrichment |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
| BP | GO:0017038 | protein import | IEP | Enrichment |
| MF | GO:0019239 | deaminase activity | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| CC | GO:0030117 | membrane coat | IEP | Enrichment |
| CC | GO:0030127 | COPII vesicle coat | IEP | Enrichment |
| BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| BP | GO:0034504 | protein localization to nucleus | IEP | Enrichment |
| BP | GO:0034613 | cellular protein localization | IEP | Enrichment |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Enrichment |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Enrichment |
| BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0051169 | nuclear transport | IEP | Enrichment |
| BP | GO:0051170 | import into nucleus | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| MF | GO:0061608 | nuclear import signal receptor activity | IEP | Enrichment |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0071806 | protein transmembrane transport | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| CC | GO:0098796 | membrane protein complex | IEP | Enrichment |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | Enrichment |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Enrichment |
| MF | GO:0140104 | molecular carrier activity | IEP | Enrichment |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Enrichment |
| MF | GO:0140597 | protein carrier activity | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Enrichment |
| No external refs found! |