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  5. Vocar.0072s0018.1

Vocar.0072s0018.1 (32898775)


Aliases : 32898775

Description : Rab-GTPase-TBC domain [Interproscan].


Gene families : OG_01_0000138 (OrthoFinder) Phylogenetic Tree(s): OG0000138_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0072s0018.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cre07.g315350 30774903 No description available 0.04 OrthoFinder
EOD11942 No alias Rab-GTPase-TBC domain [Interproscan]. 0.02 OrthoFinder
EOD25892 No alias Rab-GTPase-TBC domain [Interproscan]. 0.03 OrthoFinder
OT_03G01130.1 No alias Rab-GTPase-TBC domain [Interproscan]. 0.02 OrthoFinder
Sro61_g035150.1 Contig3112.g24768 USP6 N-terminal-like protein 0.01 OrthoFinder
XM_002501648.1 MICPUN_80830, 80830 Rab-GTPase-TBC domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0042255 ribosome assembly IEP Enrichment
BP GO:0042256 mature ribosome assembly IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 447 621
No external refs found!