Vocar.0066s0009.1 (32891752)

Aliases : 32891752

Description : Ribosomal protein S30 [Interproscan].

Gene families : OG_01_0004587 (OrthoFinder) Phylogenetic Tree(s): OG0004587_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0066s0009.1
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001003.33	tig00001003_g6288.t1	Protein biosynthesis.cytosolic ribosome.small subunit...	0.02	OrthoFinder
Cre16.g666301	30777782, RPS30	Protein biosynthesis.cytosolic ribosome.small subunit...	0.09	OrthoFinder
EOD14554	No alias	Ribosomal protein S30 [Interproscan].	0.02	OrthoFinder
EOD23777	No alias	Ribosomal protein S30 [Interproscan].	0.02	OrthoFinder
PTI_04G04400.1	No alias	Ribosomal protein S30 [Interproscan].	0.07	OrthoFinder
Sro1093_g240360.1	Contig384.g5162	40S ribosomal protein S30	0.07	OrthoFinder
TP01G05720.1	No alias	Ribosomal protein S30 [Interproscan].	0.05	OrthoFinder
XM_002502986.1	MICPUN_59642, 59642	Ribosomal protein S30; Ribosomal protein S15 [Interproscan].	0.06	OrthoFinder
XM_003058671.1	MicpuC2_57777, 57777	Ribosomal protein	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005739	mitochondrion	IEP	Enrichment
CC	GO:0005743	mitochondrial inner membrane	IEP	Enrichment
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Enrichment
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Enrichment
CC	GO:0005783	endoplasmic reticulum	IEP	Enrichment
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Enrichment
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Enrichment
BP	GO:0006487	protein N-linked glycosylation	IEP	Enrichment
BP	GO:0007021	tubulin complex assembly	IEP	Enrichment
BP	GO:0007023	post-chaperonin tubulin folding pathway	IEP	Enrichment
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Enrichment
BP	GO:0009060	aerobic respiration	IEP	Enrichment
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Enrichment
BP	GO:0016559	peroxisome fission	IEP	Enrichment
BP	GO:0019646	aerobic electron transport chain	IEP	Enrichment
CC	GO:0019866	organelle inner membrane	IEP	Enrichment
BP	GO:0022900	electron transport chain	IEP	Enrichment
BP	GO:0022904	respiratory electron transport chain	IEP	Enrichment
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Enrichment
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Enrichment
CC	GO:0031301	integral component of organelle membrane	IEP	Enrichment
CC	GO:0034998	oligosaccharyltransferase I complex	IEP	Enrichment
CC	GO:0045275	respiratory chain complex III	IEP	Enrichment
BP	GO:0045333	cellular respiration	IEP	Enrichment
BP	GO:0048285	organelle fission	IEP	Enrichment
MF	GO:0048487	beta-tubulin binding	IEP	Enrichment
CC	GO:0070069	cytochrome complex	IEP	Enrichment
CC	GO:0098796	membrane protein complex	IEP	Enrichment
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Enrichment
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Enrichment
CC	GO:0098803	respiratory chain complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR006846	Ribosomal_S30	3	60

External Links

No external refs found!

Vocar.0066s0009.1 (32891752)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation