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  5. Vocar.0065s0003.1

Vocar.0065s0003.1 (32886855)


Aliases : 32886855

Description : ABC-transporter extension domain; ABC transporter-like [Interproscan].


Gene families : OG_01_0000347 (OrthoFinder) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0065s0003.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.83 tig00000194_g14815.t1 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre08.g372250 30774146 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.04 OrthoFinder
Cz05g11180.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.03 OrthoFinder
Cz18g04250.t1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
Dusal.0725s00009.1 33195506 ABC transporter-like [Interproscan]. 0.02 OrthoFinder
OT_03G01660.1 No alias ABC-transporter extension domain; ABC transporter-like... 0.02 OrthoFinder
SymbC1.scaffold540.7 540.7 ABC transporter-like; ABC-transporter extension domain... 0.02 OrthoFinder
Transcript_contig_78423 78423 ABC transporter-like [Interproscan]. 0.03 OrthoFinder
XM_002508755.1 MICPUN_106164, 106164 ATP-binding cassette superfamily 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004107 chorismate synthase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 452 583
IPR003439 ABC_transporter-like_ATP-bd 124 299
IPR032781 ABC_tran_Xtn 338 425
No external refs found!