1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0064s0025.1

Vocar.0064s0025.1 (32897740)


Aliases : 32897740

Description : DEAD/DEAH box helicase domain; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0001829 (OrthoFinder) Phylogenetic Tree(s): OG0001829_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0064s0025.1
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Cre13.g592150 30784026 RNA processing.RNA splicing.spliceosome... 0.02 OrthoFinder
Cz08g03090.t1 No alias Helicase, C-terminal [Interproscan]. 0.02 OrthoFinder
Sro1274_g258400.1 Contig1491.g13629 Dependent RNA helicase 0.01 OrthoFinder
SymbC1.scaffold10265.1 10265.1 DEAD/DEAH box helicase domain [Interproscan]. 0.01 OrthoFinder
XM_003055015.1 MicpuC2_13122, 13122 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
lcl|BLLF01001759.1_cds_GFH21084.1_15561 HaLaN_18320, GFH21084 Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
lcl|BLLF01005208.1_cds_GFH30877.1_25354 HaLaN_29806, GFH30877 Helicase, C-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0009916 alternative oxidase activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
CC GO:0030289 protein phosphatase 4 complex IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 532 722
IPR001650 Helicase_C 757 865
No external refs found!