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  5. Vocar.0064s0016.1

Vocar.0064s0016.1 (32897721)


Aliases : 32897721

Description : Methylglyoxal synthase-like domain; Carbamoyl-phosphate synthetase, large subunit oligomerisation domain; Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain [Interproscan].


Gene families : OG_01_0000742 (OrthoFinder) Phylogenetic Tree(s): OG0000742_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Vocar.0064s0016.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Dusal.0736s00001.1 33193416 Carbamoyl-phosphate synthetase, large subunit... 0.02 OrthoFinder
OT_08G02520.1 No alias Carbamoyl-phosphate synthetase, large subunit... 0.03 OrthoFinder
SymbC1.scaffold1.650 1.650 Carbamoyl-phosphate synthetase, large subunit... 0.01 OrthoFinder
SymbC1.scaffold2209.9 2209.9 Carbamoyl-phosphate synthase small subunit, N-terminal... 0.02 OrthoFinder
SymbC1.scaffold4.1176 4.1176 Transcription elongation factor, GreA/GreB, C-terminal;... 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495609.1_1607 KAA8495609 CAD protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Enrichment
MF GO:0004602 glutathione peroxidase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005480 CarbamoylP_synth_lsu_oligo 505 625
IPR011607 MGS-like_dom 1048 1134
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 764 966
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 207 414
No external refs found!