Aliases : 32892933
Description : Spt6 acidic, N-terminal domain; Transcription elongation factor Spt6, YqgF domain [Interproscan].
Gene families : OG_01_0003081 (OrthoFinder) Phylogenetic Tree(s): OG0003081_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Vocar.0062s0002.1 | |
Cluster | HCCA: Cluster_24 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00001486.8 | tig00001486_g8925.t1 | Chromatin organisation.histone chaperone... | 0.03 | OrthoFinder | |
Cre09.g403182 | 30781077 | Chromatin organisation.histone chaperone... | 0.03 | OrthoFinder | |
Cz04g35080.t1 | No alias | Transcription elongation factor Spt6,... | 0.04 | OrthoFinder | |
Cz04g35090.t1 | No alias | Spt6 acidic, N-terminal domain [Interproscan]. | 0.02 | OrthoFinder | |
Sro445_g144550.1 | Contig1488.g13610 | Ty 6 homolog | 0.01 | OrthoFinder | |
lcl|VRMN01000015.1_cds_KAA8491188.1_5816 | KAA8491188 | Transcription elongation factor SPT6-like | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | Enrichment |
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Enrichment |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Enrichment |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Enrichment |
BP | GO:0001510 | RNA methylation | IEP | Enrichment |
MF | GO:0005047 | signal recognition particle binding | IEP | Enrichment |
MF | GO:0005319 | lipid transporter activity | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
CC | GO:0005694 | chromosome | IEP | Enrichment |
CC | GO:0005785 | signal recognition particle receptor complex | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006275 | regulation of DNA replication | IEP | Enrichment |
BP | GO:0006396 | RNA processing | IEP | Enrichment |
BP | GO:0006397 | mRNA processing | IEP | Enrichment |
BP | GO:0006473 | protein acetylation | IEP | Enrichment |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Enrichment |
BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006869 | lipid transport | IEP | Enrichment |
BP | GO:0008156 | negative regulation of DNA replication | IEP | Enrichment |
BP | GO:0008380 | RNA splicing | IEP | Enrichment |
BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Enrichment |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Enrichment |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016071 | mRNA metabolic process | IEP | Enrichment |
BP | GO:0016569 | covalent chromatin modification | IEP | Enrichment |
BP | GO:0016570 | histone modification | IEP | Enrichment |
BP | GO:0016573 | histone acetylation | IEP | Enrichment |
BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Enrichment |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Enrichment |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Enrichment |
CC | GO:0031248 | protein acetyltransferase complex | IEP | Enrichment |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Enrichment |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Enrichment |
BP | GO:0036260 | RNA capping | IEP | Enrichment |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0043414 | macromolecule methylation | IEP | Enrichment |
BP | GO:0043543 | protein acylation | IEP | Enrichment |
MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
BP | GO:0045005 | DNA-dependent DNA replication maintenance of fidelity | IEP | Enrichment |
BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
BP | GO:0048478 | replication fork protection | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0051668 | localization within membrane | IEP | Enrichment |
BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
BP | GO:0090329 | regulation of DNA-dependent DNA replication | IEP | Enrichment |
CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
CC | GO:1902493 | acetyltransferase complex | IEP | Enrichment |
BP | GO:2000104 | negative regulation of DNA-dependent DNA replication | IEP | Enrichment |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
No external refs found! |