Vocar.0056s0039.1 (32896677)


Aliases : 32896677

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0002216 (OrthoFinder) Phylogenetic Tree(s): OG0002216_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0056s0039.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cre09.g389912 30781392 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder
PTI_01G02800.1 No alias PLAA family ubiquitin binding domain; PUL domain; WD40... 0.04 OrthoFinder
Sro495_g154490.1 Contig3243.g25629 Phospholipase A-2-activating protein 0.05 OrthoFinder
XM_003059835.1 MicpuC2_40685, 40685 PLAA family ubiquitin binding domain; PUL domain; WD40... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 66 107
IPR001680 WD40_repeat 8 39
No external refs found!