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  5. Vocar.0055s0051.1

Vocar.0055s0051.1 (32891626)


Aliases : 32891626

Description : Cytochrome b/b6, N-terminal; Homing endonuclease, LAGLIDADG [Interproscan].


Gene families : OG_01_0005035 (OrthoFinder) Phylogenetic Tree(s): OG0005035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0055s0051.1
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
CzCPg01070.t1 No alias Cytochrome b/b6, N-terminal [Interproscan]. 0.04 OrthoFinder
CzMTg00010.t1 No alias Cytochrome b/b6, N-terminal; Cytochrome b/b6, C-terminal... 0.04 OrthoFinder
CzMTg00020.t1 No alias Homing endonuclease, LAGLIDADG [Interproscan]. 0.03 OrthoFinder
Sro51_chlor_g030360.1 PetB PetB 0.02 OrthoFinder
TPMG00660.1 No alias Cytochrome b/b6, N-terminal; Heat shock factor... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
InterPro domains Description Start Stop
IPR005797 Cyt_b/b6_N 18 141
IPR004860 LAGLIDADG_2 172 338
No external refs found!