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  5. Vocar.0054s0048.1

Vocar.0054s0048.1 (32894612)


Aliases : 32894612

Description : WD40 repeat; Anaphase-promoting complex subunit 4, WD40 domain [Interproscan].


Gene families : OG_01_0000709 (OrthoFinder) Phylogenetic Tree(s): OG0000709_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0054s0048.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
XM_002502920.1 MICPUN_83216, 83216 Hypothetical protein (CDH1-CCS52) 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004181 metallocarboxypeptidase activity IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004620 phospholipase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006071 glycerol metabolic process IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
MF GO:0008235 metalloexopeptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
MF GO:0008241 peptidyl-dipeptidase activity IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
BP GO:0019400 alditol metabolic process IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 309 342
IPR001680 WD40_repeat 348 387
IPR001680 WD40_repeat 436 472
IPR024977 Apc4_WD40_dom 229 282
No external refs found!