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  5. Vocar.0049s0039.1

Vocar.0049s0039.1 (32886533)


Aliases : 32886533

Description : CASP, C-terminal [Interproscan].


Gene families : OG_01_0001460 (OrthoFinder) Phylogenetic Tree(s): OG0001460_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0049s0039.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cre08.g382650 30774088, UBQ4 Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder
Cz07g20140.t1 No alias CASP, C-terminal [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030173 integral component of Golgi membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0004659 prenyltransferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008318 protein prenyltransferase activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0017025 TBP-class protein binding IEP Enrichment
BP GO:0018342 protein prenylation IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0097354 prenylation IEP Enrichment
MF GO:0140296 general transcription initiation factor binding IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR012955 CASP_C 481 688
IPR012955 CASP_C 773 846
No external refs found!