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  5. Vocar.0049s0026.1

Vocar.0049s0026.1 (32886560)


Aliases : 32886560

Description : Longin domain; Synaptobrevin [Interproscan].


Gene families : OG_01_0000737 (OrthoFinder) Phylogenetic Tree(s): OG0000737_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0049s0026.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cre04.g225900 30791475 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder
Cz12g25190.t1 No alias Longin domain; Synaptobrevin [Interproscan]. 0.01 OrthoFinder
OT_06G03190.1 No alias Synaptobrevin; Longin domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
InterPro domains Description Start Stop
IPR010908 Longin_dom 33 108
IPR001388 Synaptobrevin 127 212
No external refs found!