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  5. Vocar.0048s0044.1

Vocar.0048s0044.1 (32893666)


Aliases : 32893666

Description : Ubiquitin system component CUE [Interproscan].


Gene families : OG_01_0007028 (OrthoFinder) Phylogenetic Tree(s): OG0007028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0048s0044.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000004.1_cds_PRW59117.1_6921 PRW59117 CUE domain containing 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
CC GO:0090730 Las1 complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR003892 CUE 60 94
No external refs found!