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  5. Vocar.0047s0064.1

Vocar.0047s0064.1 (32899302)


Aliases : 32899302

Description : Ubiquitin carboxyl-terminal hydrolase, C-terminal; Peptidase C19, ubiquitin carboxyl-terminal hydrolase; Ubiquitin carboxyl-terminal hydrolase 7, ICP0-binding domain [Interproscan].


Gene families : OG_01_0000492 (OrthoFinder) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0047s0064.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000217.46 tig00000217_g19176.t1 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.03 OrthoFinder
Cpa|evm.model.tig00021350.30 tig00021350_g20646.t1 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder
Cpa|evm.model.tig00021502.2 tig00021502_g22052.t1 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder
Cre01.g030450 30788364 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder
Cre07.g336200 30774569 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz04g08070.t1 No alias Ubiquitin-like domain; Peptidase C19, ubiquitin... 0.03 OrthoFinder
Cz07g24170.t1 No alias Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.04 OrthoFinder
Dusal.0097s00017.1 33203700 Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.03 OrthoFinder
EOD33970 No alias MATH/TRAF domain; Ubiquitin carboxyl-terminal hydrolase... 0.02 OrthoFinder
OT_02G02970.1 No alias Ubiquitin carboxyl-terminal hydrolase, C-terminal;... 0.03 OrthoFinder
Sro1304_g261100.1 Contig1395.g12836 Probable ubiquitin carboxyl-terminal hydrolase creB 0.02 OrthoFinder
Transcript_contig_3099 3099 Peptidase C19, ubiquitin carboxyl-terminal hydrolase... 0.02 OrthoFinder
Transcript_contig_54363 54363 MATH/TRAF domain; Peptidase C19, ubiquitin... 0.03 OrthoFinder
XM_002504315.1 MICPUN_61497, 61497 MATH/TRAF domain; RING/Ubox like zinc-binding domain... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
CC GO:0031248 protein acetyltransferase complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1902493 acetyltransferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR029346 USP_C 900 1075
IPR024729 USP7_ICP0-binding_dom 622 890
IPR001394 Peptidase_C19_UCH 192 514
No external refs found!