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  5. Vocar.0046s0007.1

Vocar.0046s0007.1 (32892978)


Aliases : 32892978

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0002057 (OrthoFinder) Phylogenetic Tree(s): OG0002057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0046s0007.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000037.9 tig00000037_g10076.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021234.21 tig00021234_g19395.t1 No description available 0.07 OrthoFinder
Cre04.g217914 30791574, FAP57 No description available 0.1 OrthoFinder
Cz04g35040.t1 No alias Hypothetical protein 0.04 OrthoFinder
Cz05g04330.t1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
EOD14713 No alias Hypothetical protein [Ensembl]. 0.04 OrthoFinder
SymbC1.scaffold956.9 956.9 IQ motif, EF-hand binding site [Interproscan]. 0.01 OrthoFinder
XM_003057384.1 MicpuC2_25887, 25887 WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01001122.1_cds_GFH17276.1_11753 HaLaN_13874, GFH17276 WD_REPEATS_REGION domain-containing protein 0.04 OrthoFinder
lcl|BLLF01003588.1_cds_GFH27713.1_22190 HaLaN_26083, GFH27713 WD40 repeat [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01006730.1_cds_GFH32507.1_26984 HaLaN_31739, GFH32507 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 339 370
IPR001680 WD40_repeat 520 550
No external refs found!