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  5. Vocar.0045s0018.1

Vocar.0045s0018.1 (32887802)


Aliases : 32887802

Description : Ribosomal biogenesis regulatory protein [Interproscan].


Gene families : OG_01_0003990 (OrthoFinder) Phylogenetic Tree(s): OG0003990_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0045s0018.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Cre01.g020950 30788544 Ribosome biogenesis regulatory protein homolog... 0.04 OrthoFinder
Cz07g15250.t1 No alias Ribosomal biogenesis regulatory protein [Interproscan]. 0.03 OrthoFinder
EOD32863 No alias Ribosomal biogenesis regulatory protein [Interproscan]. 0.02 OrthoFinder
OT_15G01720.1 No alias Ribosomal biogenesis regulatory protein [Interproscan]. 0.03 OrthoFinder
PTI_07G04280.1 No alias Ribosomal biogenesis regulatory protein [Interproscan]. 0.03 OrthoFinder
Sro147_g067750.1 Contig246.g2998 Biogenesis regulatory protein homolog 0.03 OrthoFinder
XM_002504986.1 MICPUN_62728, 62728 Ribosomal biogenesis regulatory protein [Interproscan]. 0.05 OrthoFinder
XM_003060538.1 MicpuC2_59933, 59933 Ribosomal biogenesis regulatory protein [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR007023 Ribosom_reg 31 190
No external refs found!