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  5. Vocar.0043s0052.1

Vocar.0043s0052.1 (32886923)


Aliases : 32886923

Description : WD40 repeat [Interproscan].


Gene families : OG_01_0001223 (OrthoFinder) Phylogenetic Tree(s): OG0001223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0043s0052.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.30 tig00000144_g9019.t1 Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder
Cpa|evm.model.tig00020848.59 tig00020848_g14589.t1 Cytoskeleton.microtubular network.Dynein... 0.04 OrthoFinder
Cre12.g520950 30793100, BOP5 Cytoskeleton.microtubular network.Dynein... 0.14 OrthoFinder
Cre12.g536550 30792084, ODA9 Cytoskeleton.microtubular network.Dynein... 0.15 OrthoFinder
Cz05g02230.t1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Cz10g21180.t1 No alias WD40 repeat [Interproscan]. 0.01 OrthoFinder
Dusal.1111s00003.1 33193631 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_002503421.1 MICPUN_83829, 83829 Dynein, 78 kDa intermediate chain, flagellar outer arm (ODA9) 0.05 OrthoFinder
XM_003055617.1 MicpuC2_50559, 50559 Flagellar outer dynein arm intermediate chain 1 (ODA-IC1) 0.05 OrthoFinder
lcl|BLLF01000623.1_cds_GFH13531.1_8008 HaLaN_09431, GFH13531 Dynein, 78 kDa intermediate chain, flagellar outer arm 0.02 OrthoFinder
lcl|BLLF01000623.1_cds_GFH13532.1_8009 HaLaN_09432, GFH13532 Flagellar outer dynein arm intermediate chain 1 0.05 OrthoFinder
lcl|BLLF01003261.1_cds_GFH26850.1_21327 HaLaN_25069, GFH26850 WD_REPEATS_REGION domain-containing protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
BP GO:0000271 polysaccharide biosynthetic process IEP Enrichment
CC GO:0001534 radial spoke IEP Enrichment
BP GO:0003341 cilium movement IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006077 (1->6)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006078 (1->6)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0060294 cilium movement involved in cell motility IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 508 546
IPR001680 WD40_repeat 353 387
No external refs found!