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  5. Vocar.0043s0034.1

Vocar.0043s0034.1 (32886883)


Aliases : 32886883

Description : Domain of unknown function DUF218 [Interproscan].


Gene families : OG_01_0001983 (OrthoFinder) Phylogenetic Tree(s): OG0001983_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0043s0034.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001264.12 tig00001264_g7868.t1 No description available 0.02 OrthoFinder
EOD24489 No alias Domain of unknown function DUF218 [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009411 response to UV IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
InterPro domains Description Start Stop
IPR003848 DUF218 80 210
No external refs found!