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  5. Vocar.0043s0030.1

Vocar.0043s0030.1 (32886890)


Aliases : 32886890

Description : Proteasome alpha-subunit, N-terminal domain; Proteasome, subunit alpha/beta [Interproscan].


Gene families : OG_01_0002755 (OrthoFinder) Phylogenetic Tree(s): OG0002755_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0043s0030.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.40 tig00021357_g20766.t1 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana 0.08 OrthoFinder
Cre08.g373250 30773949, POA2 Protein degradation.26S proteasome.20S core... 0.08 OrthoFinder
Cz05g10060.t1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.03 OrthoFinder
EOD39539 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.07 OrthoFinder
OT_06G00220.1 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
PTI_25G01000.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.03 OrthoFinder
Sro63_g035860.1 Contig2778.g22351 Proteasome subunit alpha 0.07 OrthoFinder
TP22G01710.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.05 OrthoFinder
XM_002500738.1 MICPUN_56599, 56599 Proteasome, subunit alpha/beta [Interproscan]. 0.04 OrthoFinder
XM_003059320.1 MicpuC2_49610, 49610 Proteasome, subunit alpha/beta [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01002018.1_cds_GFH22338.1_16815 HaLaN_19789, GFH22338 Proteasome subunit alpha type 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44892.1_1655 PRW44892 20S proteasome alpha subunit B 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498323.1_7276 KAA8498323 Proteasome subunit alpha type-2-A 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
CC GO:0005892 acetylcholine-gated channel complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0030008 TRAPP complex IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
CC GO:0034702 ion channel complex IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
CC GO:0043235 receptor complex IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:0098802 plasma membrane signaling receptor complex IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 6 28
IPR001353 Proteasome_sua/b 30 213
No external refs found!