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  5. Vocar.0043s0027.1

Vocar.0043s0027.1 (32886858)


Aliases : 32886858

Description : Biotin carboxylase-like, N-terminal domain; Acetyl-CoA carboxylase, central domain; Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Acetyl-CoA carboxylase; Biotin/lipoyl attachment; Biotin carboxylase, C-terminal [Interproscan].


Gene families : OG_01_0000506 (OrthoFinder) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0043s0027.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
PTI_30G01050.1 No alias Biotin/lipoyl attachment; Biotin carboxylase-like,... 0.02 OrthoFinder
XM_002507048.1 MICPUN_113382, 113382 Acetyl-coa carboxylase 0.02 OrthoFinder
lcl|VRMN01000017.1_cds_KAA8491002.1_6205 KAA8491002 Acetyl-CoA carboxylase 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
InterPro domains Description Start Stop
IPR005482 Biotin_COase_C 464 571
IPR034733 AcCoA_carboxyl 2283 2412
IPR034733 AcCoA_carboxyl 1726 2224
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 239 428
IPR000089 Biotin_lipoyl 711 775
IPR005481 BC-like_N 133 193
IPR013537 AcCoA_COase_cen 1175 1334
No external refs found!