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  5. Vocar.0043s0020.1

Vocar.0043s0020.1 (32886955)


Aliases : 32886955

Description : High-CO2 inducible periplasmic protein [Interproscan].


Gene families : OG_01_0005896 (OrthoFinder) Phylogenetic Tree(s): OG0005896_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0043s0020.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cre12.g546550 30792092, FEA1 Nutrient uptake.iron uptake.non-vascular plant-specific... 0.02 OrthoFinder
Cre12.g546600 30791935, FEA2 Nutrient uptake.iron uptake.non-vascular plant-specific... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR011643 HCR1 10 360
No external refs found!