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  5. Vocar.0042s0065.1

Vocar.0042s0065.1 (32892099)


Aliases : 32892099

Description : RlpA-like protein, double-psi beta-barrel domain [Interproscan].


Gene families : OG_01_0000528 (OrthoFinder) Phylogenetic Tree(s): OG0000528_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0042s0065.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01003370.1_cds_GFH27159.1_21636 HaLaN_25434, GFH27159 Expansin 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Enrichment
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0030915 Smc5-Smc6 complex IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0033176 proton-transporting V-type ATPase complex IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055070 copper ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
CC GO:0106068 SUMO ligase complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 106 196
No external refs found!