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  5. Vocar.0042s0009.1

Vocar.0042s0009.1 (32892054)


Aliases : 32892054

Description : RNA recognition motif domain; PWI domain [Interproscan].


Gene families : OG_01_0003063 (OrthoFinder) Phylogenetic Tree(s): OG0003063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0042s0009.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cre08.g375084 30773871 No description available 0.03 OrthoFinder
SymbC1.scaffold3807.1 3807.1 RNA recognition motif domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000593.1_cds_GFH13274.1_7751 HaLaN_09124, GFH13274 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59762.1_6151 PRW59762 RNA-binding 25 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
BP GO:0030328 prenylcysteine catabolic process IEP Enrichment
BP GO:0030329 prenylcysteine metabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
BP GO:0042219 cellular modified amino acid catabolic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 103 172
IPR002483 PWI_dom 723 789
No external refs found!