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  5. Vocar.0041s0075.1

Vocar.0041s0075.1 (32888749)


Aliases : 32888749

Description : Methylmalonic aciduria and homocystinuria type C family [Interproscan].


Gene families : OG_01_0005433 (OrthoFinder) Phylogenetic Tree(s): OG0005433_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0041s0075.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
Cre16.g654750 30776970 No description available 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
CC GO:0005856 cytoskeleton IEP Enrichment
CC GO:0005885 Arp2/3 protein complex IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007015 actin filament organization IEP Enrichment
BP GO:0007051 spindle organization IEP Enrichment
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Enrichment
BP GO:0008154 actin polymerization or depolymerization IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0010638 positive regulation of organelle organization IEP Enrichment
CC GO:0015629 actin cytoskeleton IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0019207 kinase regulator activity IEP Enrichment
MF GO:0019887 protein kinase regulator activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030041 actin filament polymerization IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0030832 regulation of actin filament length IEP Enrichment
BP GO:0030833 regulation of actin filament polymerization IEP Enrichment
BP GO:0030838 positive regulation of actin filament polymerization IEP Enrichment
BP GO:0031334 positive regulation of protein-containing complex assembly IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0032271 regulation of protein polymerization IEP Enrichment
BP GO:0032273 positive regulation of protein polymerization IEP Enrichment
CC GO:0032299 ribonuclease H2 complex IEP Enrichment
BP GO:0032535 regulation of cellular component size IEP Enrichment
BP GO:0032956 regulation of actin cytoskeleton organization IEP Enrichment
BP GO:0032970 regulation of actin filament-based process IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0043254 regulation of protein-containing complex assembly IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044087 regulation of cellular component biogenesis IEP Enrichment
BP GO:0044089 positive regulation of cellular component biogenesis IEP Enrichment
BP GO:0045010 actin nucleation IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Enrichment
BP GO:0048518 positive regulation of biological process IEP Enrichment
BP GO:0048522 positive regulation of cellular process IEP Enrichment
BP GO:0051130 positive regulation of cellular component organization IEP Enrichment
BP GO:0051225 spindle assembly IEP Enrichment
BP GO:0051258 protein polymerization IEP Enrichment
BP GO:0051493 regulation of cytoskeleton organization IEP Enrichment
BP GO:0051495 positive regulation of cytoskeleton organization IEP Enrichment
MF GO:0051920 peroxiredoxin activity IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
CC GO:0070652 HAUS complex IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
BP GO:0090066 regulation of anatomical structure size IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097020 COPII receptor activity IEP Enrichment
BP GO:0097435 supramolecular fiber organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0097526 spliceosomal tri-snRNP complex IEP Enrichment
BP GO:0110053 regulation of actin filament organization IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
BP GO:1902903 regulation of supramolecular fiber organization IEP Enrichment
BP GO:1902905 positive regulation of supramolecular fiber organization IEP Enrichment
InterPro domains Description Start Stop
IPR032037 MMACHC 20 232
No external refs found!