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  5. Vocar.0041s0011.1

Vocar.0041s0011.1 (32888767)


Aliases : 32888767

Description : Armadillo; HEAT repeat associated with sister chromatid cohesion protein [Interproscan].


Gene families : OG_01_0007109 (OrthoFinder) Phylogenetic Tree(s): OG0007109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0041s0011.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2178.4 2178.4 Armadillo [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
InterPro domains Description Start Stop
IPR026003 Cohesin_HEAT 286 307
IPR000225 Armadillo 532 569
No external refs found!