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  5. Vocar.0040s0053.1

Vocar.0040s0053.1 (32886242)


Aliases : 32886242

Description : C2 domain; Copine [Interproscan].


Gene families : OG_01_0000243 (OrthoFinder) Phylogenetic Tree(s): OG0000243_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0040s0053.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Sro382_g131140.1 Contig4152.g31698 Copine-6 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003700 DNA-binding transcription factor activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR010734 Copine_C 353 562
IPR000008 C2_dom 189 287
IPR000008 C2_dom 51 154
No external refs found!