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Aliases : 32886275
Description : Radical SAM [Interproscan].
Gene families : OG_01_0001840 (OrthoFinder) Phylogenetic Tree(s): OG0001840_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0040s0008.1 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz13g11290.t1 | No alias | Radical SAM [Interproscan]. | 0.02 | OrthoFinder | |
| Cz13g11300.t1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| Dusal.0590s00003.1 | 33190527 | Radical SAM [Interproscan]. | 0.02 | OrthoFinder | |
| Transcript_contig_55852 | 55852 | Radical SAM [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| MF | GO:0051536 | iron-sulfur cluster binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
| MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | Enrichment |
| MF | GO:0004177 | aminopeptidase activity | IEP | Enrichment |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
| MF | GO:0005096 | GTPase activator activity | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Enrichment |
| MF | GO:0008047 | enzyme activator activity | IEP | Enrichment |
| MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009092 | homoserine metabolic process | IEP | Enrichment |
| BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| BP | GO:0019346 | transsulfuration | IEP | Enrichment |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
| MF | GO:0030145 | manganese ion binding | IEP | Enrichment |
| MF | GO:0030695 | GTPase regulator activity | IEP | Enrichment |
| MF | GO:0034061 | DNA polymerase activity | IEP | Enrichment |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Enrichment |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Enrichment |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
| No external refs found! |