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  5. Vocar.0037s0090.1

Vocar.0037s0090.1 (32897640)


Aliases : 32897640

Description : WD40 repeat; Signal transduction response regulator, receiver domain [Interproscan].


Gene families : OG_01_0001635 (OrthoFinder) Phylogenetic Tree(s): OG0001635_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0037s0090.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre01.g053850 30788730 WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 0.06 OrthoFinder
Cre02.g085050 30785833 E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.06 OrthoFinder
Cz05g04250.t1 No alias WD40 repeat [Interproscan]. 0.04 OrthoFinder
Cz09g04220.t1 No alias Hypothetical protein 0.04 OrthoFinder
Transcript_contig_56325 56325 WD40 repeat; Zinc finger, C3HC4 type (RING finger)... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 27 138
IPR001680 WD40_repeat 1335 1368
IPR001680 WD40_repeat 1249 1285
No external refs found!