1. Home
  2. Species
  3. Volvox carteri
  4. Sequence
  5. Vocar.0037s0088.1

Vocar.0037s0088.1 (32897567)


Aliases : 32897567

Description : Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan].


Gene families : OG_01_0000476 (OrthoFinder) Phylogenetic Tree(s): OG0000476_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0037s0088.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre03.g207900 30787688, CYCA1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.05 OrthoFinder
Cre08.g370401 30773725 Cyclin-B2-2 OS=Arabidopsis thaliana 0.08 OrthoFinder
Cz01g07180.t1 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.06 OrthoFinder
Cz05g21230.t1 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.04 OrthoFinder
Dusal.0008s00039.1 33198871 Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD13446 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.02 OrthoFinder
EOD40142 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.01 OrthoFinder
OT_01G06190.1 No alias Cyclin, C-terminal domain; Cyclin, N-terminal [Interproscan]. 0.03 OrthoFinder
Sro331_g119100.1 Contig3186.g25147 B-type cyclin 0.01 OrthoFinder
Sro781_g201590.1 Contig678.g7942 B-type cyclin 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56788.1_9556 PRW56788 B-type cyclin isoform B 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499209.1_8162 KAA8499209 G1/S-specific cyclin-D3 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495714.1_1712 KAA8495714 G2/mitotic-specific cyclin-A 0.02 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492954.1_2690 KAA8492954 Cyclin-B2-2 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0001401 SAM complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Enrichment
CC GO:0005849 mRNA cleavage factor complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006378 mRNA polyadenylation IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006528 asparagine metabolic process IEP Enrichment
BP GO:0006529 asparagine biosynthetic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030915 Smc5-Smc6 complex IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0051087 chaperone binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098799 outer mitochondrial membrane protein complex IEP Enrichment
CC GO:0106068 SUMO ligase complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006671 Cyclin_N 171 296
IPR004367 Cyclin_C-dom 299 417
No external refs found!