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  5. Vocar.0037s0078.1

Vocar.0037s0078.1 (32897515)


Aliases : 32897515

Description : Ribosomal protein S27e [Interproscan].


Gene families : OG_01_0000897 (OrthoFinder) Phylogenetic Tree(s): OG0000897_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0037s0078.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001299.2 tig00001299_g8061.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder
Cre12.g529400 30792485, RPS27e1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 OrthoFinder
Dusal.0308s00024.1 33194639 Ribosomal protein S27e [Interproscan]. 0.11 OrthoFinder
EOD06206 No alias Ribosomal protein S27e [Interproscan]. 0.07 OrthoFinder
EOD35321 No alias Ribosomal protein S27e [Interproscan]. 0.07 OrthoFinder
OT_16G00070.1 No alias Ribosomal protein S27e [Interproscan]. 0.07 OrthoFinder
PTI_00G03050.1 No alias Ribosomal protein S27e [Interproscan]. 0.12 OrthoFinder
TP14G02220.1 No alias Ribosomal protein S27e [Interproscan]. 0.16 OrthoFinder
XM_002502682.1 MICPUN_108364, 108364 Ribosomal protein S27e [Interproscan]. 0.16 OrthoFinder
lcl|BLLF01002835.1_cds_GFH25509.1_19986 HaLaN_23488, GFH25509 40S ribosomal protein S27 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05814.1_5981 PRW05814 Plant intracellular Ras-group-related LRR 7 isoform B 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006487 protein N-linked glycosylation IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
CC GO:0008250 oligosaccharyltransferase complex IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000592 Ribosomal_S27 30 84
No external refs found!