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  5. Vocar.0037s0035.1

Vocar.0037s0035.1 (32897589)


Aliases : 32897589

Description : Ribosomal protein L11, C-terminal; Ribosomal protein L11, N-terminal [Interproscan].


Gene families : OG_01_0003120 (OrthoFinder) Phylogenetic Tree(s): OG0003120_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Vocar.0037s0035.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001339.27 tig00001339_g8284.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 OrthoFinder
Cre12.g528750 30793215, RPL12 Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 OrthoFinder
Cz05g19110.t1 No alias Ribosomal protein L11, N-terminal [Interproscan]. 0.14 OrthoFinder
EOD41717 No alias Ribosomal protein L11, C-terminal [Interproscan]. 0.03 OrthoFinder
OT_03G05460.1 No alias Ribosomal protein L11, N-terminal; Ribosomal protein... 0.06 OrthoFinder
PTI_14G02490.1 No alias Ribosomal protein L11, N-terminal; Ribosomal protein... 0.11 OrthoFinder
Sro82_g043980.1 Contig4032.g30989 60S ribosomal protein L12 (Fragment) 0.07 OrthoFinder
TP02G01920.1 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.08 OrthoFinder
XM_002507253.1 MICPUN_106714, 106714 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.08 OrthoFinder
XM_003054785.1 MicpuC2_30629, 30629 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.02 OrthoFinder
lcl|LHPG02000012.1_cds_PRW45184.1_1960 PRW45184 60S ribosomal L12-1 0.05 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495636.1_1634 KAA8495636 60S ribosomal protein L12 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 10 70
IPR020783 Ribosomal_L11_C 75 144
No external refs found!