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  5. Vocar.0036s0095.1

Vocar.0036s0095.1 (32892195)


Aliases : 32892195

Description : Symplekin C-terminal; Symplekin/Pta1, N-terminal [Interproscan].


Gene families : OG_01_0002970 (OrthoFinder) Phylogenetic Tree(s): OG0002970_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0036s0095.1
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Cz03g09030.t1 No alias Symplekin/Pta1, N-terminal; Symplekin C-terminal [Interproscan]. 0.02 OrthoFinder
XM_003061975.1 MicpuC2_41992, 41992 Symplekin C-terminal; Symplekin/Pta1, N-terminal [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45692.1_1196 PRW45692 Symplekin isoform X1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0004408 holocytochrome-c synthase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006869 lipid transport IEP Enrichment
BP GO:0007009 plasma membrane organization IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0015748 organophosphate ester transport IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015914 phospholipid transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
BP GO:0017121 plasma membrane phospholipid scrambling IEP Enrichment
MF GO:0017128 phospholipid scramblase activity IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0034204 lipid translocation IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0045332 phospholipid translocation IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0097035 regulation of membrane lipid distribution IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:0140303 intramembrane lipid transporter activity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR022075 Symplekin_C 1435 1612
IPR032460 Symplekin/Pta1_N 106 324
No external refs found!