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  5. Vocar.0036s0086.1

Vocar.0036s0086.1 (32892260)


Aliases : 32892260

Description : Kinetochore protein Ndc80 [Interproscan].


Gene families : OG_01_0003290 (OrthoFinder) Phylogenetic Tree(s): OG0003290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0036s0086.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Dusal.0192s00006.1 33198688 Kinetochore protein Ndc80 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000016.1_cds_PRW33702.1_3194 PRW33702 Kinetochore NDC80 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0031262 Ndc80 complex IEA Interproscan
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004784 superoxide dismutase activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006801 superoxide metabolic process IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009411 response to UV IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0072593 reactive oxygen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005550 Kinetochore_Ndc80 69 193
No external refs found!