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  5. Vocar.0036s0068.1

Vocar.0036s0068.1 (32892274)


Aliases : 32892274

Description : CCT domain; Signal transduction response regulator, receiver domain [Interproscan].


Gene families : OG_01_0000376 (OrthoFinder) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0036s0068.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021680.21 tig00021680_g23043.t1 No description available 0.01 OrthoFinder
Cre02.g094150 30785337 Two-component response regulator-like APRR9... 0.02 OrthoFinder
Cre06.g278200 30779660 No description available 0.03 OrthoFinder
Cre07.g351550 30774506 No description available 0.02 OrthoFinder
Cz13g02190.t1 No alias Signal transduction response regulator, receiver domain;... 0.02 OrthoFinder
Transcript_contig_79088 79088 B-box-type zinc finger; CCT domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002020.1_cds_GFH22350.1_16827 HaLaN_19802, GFH22350 CCT domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003682 chromatin binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0070403 NAD+ binding IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 5 119
IPR010402 CCT_domain 1215 1257
No external refs found!