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  5. Vocar.0034s0079.1

Vocar.0034s0079.1 (32893040)


Aliases : 32893040

Description : Ribosomal protein S15; Ribosomal protein S13/S15, N-terminal [Interproscan].


Gene families : OG_01_0003390 (OrthoFinder) Phylogenetic Tree(s): OG0003390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0034s0079.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cre07.g331900 30774339, RPS13 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cz07g16040.t1 No alias Ribosomal protein S15 [Interproscan]. 0.01 OrthoFinder
EOD30715 No alias Ribosomal protein S15; Ribosomal protein S13/S15,... 0.02 OrthoFinder
EOD34926 No alias 40S ribosomal protein S13 [Ensembl]. 0.02 OrthoFinder
OT_01G03170.1 No alias Ribosomal protein S13/S15, N-terminal; Ribosomal protein... 0.02 OrthoFinder
Sro611_g175300.1 Contig1882.g16411 40S ribosomal protein S13 0.01 OrthoFinder
SymbC1.scaffold2720.1 2720.1 Glycosyltransferase, DXD sugar-binding motif; Ribosomal... 0.05 OrthoFinder
XM_002504263.1 MICPUN_108906, 108906 Ribosomal protein S15; Ribosomal protein S13/S15,... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR012606 Ribosomal_S13/S15_N 1 60
IPR000589 Ribosomal_S15 81 146
No external refs found!