Vocar.0033s0145.1 (32886459)

Aliases : 32886459

Description : Histone H2A/H2B/H3 [Interproscan].

Gene families : OG_01_0000015 (OrthoFinder) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0033s0145.1
Cluster	HCCA: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
Cre17.g708150	30782647, HTR36	Chromatin organisation.histones.H3-type histone	0.03	OrthoFinder
Sro348_g123190.1	Contig2346.g19285	Histone H3	0.01	OrthoFinder
TP07G03200.1	No alias	Histone H2A/H2B/H3 [Interproscan].	0.03	OrthoFinder
TP07G03270.1	No alias	Histone H2A/H2B/H3 [Interproscan].	0.03	OrthoFinder
TP14G03390.1	No alias	Histone H2A/H2B/H3 [Interproscan].	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0032993	protein-DNA complex	None	Extended
CC	GO:0044815	DNA packaging complex	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
CC	GO:0005875	microtubule associated complex	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
CC	GO:0030286	dynein complex	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR007125	Histone_H2A/H2B/H3	1	131

External Links

No external refs found!