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  5. Vocar.0033s0072.1

Vocar.0033s0072.1 (32886356)


Aliases : 32886356

Description : Ribulose bisphosphate carboxylase small chain, domain [Interproscan].


Gene families : OG_01_0001359 (OrthoFinder) Phylogenetic Tree(s): OG0001359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0033s0072.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
Cre02.g120150 30786468, RBCS2 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder
Sro51_chlor_g030110.1 RbcS RbcS 0.03 OrthoFinder
TPCG00230.1 No alias Ribulose bisphosphate carboxylase small chain, domain... 0.01 OrthoFinder
Vocar.0033s0069.1 32886463 Ribulose bisphosphate carboxylase small chain, domain... 0.03 OrthoFinder
XM_003064579.1 MicpuC2_66674, 66674 Ribulose bisphosphate carboxylase small chain, domain... 0.03 OrthoFinder
lcl|BLLF01000015.1_cds_GFH05957.1_434 HaLaN_00508, GFH05957 Ribulose bisphosphate carboxylase small chain 0.02 OrthoFinder
lcl|BLLF01001246.1_cds_GFH18086.1_12563 HaLaN_14829, GFH18086 Ribulose bisphosphate carboxylase small chain 0.05 OrthoFinder
lcl|BLLF01001696.1_cds_GFH20785.1_15262 HaLaN_17963, GFH20785 Ribulose bisphosphate carboxylase small chain 0.1 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60509.1_4708 PRW60509 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60779.1_4709 PRW60779 Ribulose bisphosphate small subunit precursor 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 57 171
No external refs found!