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  5. Vocar.0031s0112.1

Vocar.0031s0112.1 (32890137)


Aliases : 32890137

Description : Ribosomal protein L36e [Interproscan].


Gene families : OG_01_0003108 (OrthoFinder) Phylogenetic Tree(s): OG0003108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0031s0112.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021493.69 tig00021493_g21908.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder
Cre12.g484050 30792099, RPL36 Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 OrthoFinder
Cz06g33040.t1 No alias Ribosomal protein L36e [Interproscan]. 0.18 OrthoFinder
Dusal.1916s00002.1 33187807 Ribosomal protein L36e [Interproscan]. 0.06 OrthoFinder
EOD30407 No alias Ribosomal protein L36e [Interproscan]. 0.08 OrthoFinder
OT_02G00860.1 No alias Ribosomal protein L36e [Interproscan]. 0.07 OrthoFinder
PTI_04G00610.1 No alias Ribosomal protein L36e [Interproscan]. 0.21 OrthoFinder
Sro327_g118470.1 Contig839.g9255 60S ribosomal protein L36 0.23 OrthoFinder
SymbC1.scaffold1291.12 1291.12 Ribosomal protein L36e [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold1291.13 1291.13 Ribosomal protein L36e [Interproscan]. 0.03 OrthoFinder
TP04G05720.1 No alias Ribosomal protein L36e [Interproscan]. 0.23 OrthoFinder
XM_002507094.1 MICPUN_114038, 114038 60S ribosomal protein L36 (RPL36) 0.12 OrthoFinder
XM_003056471.1 MicpuC2_31782, 31782 60S ribosomal protein L36 (RPL36) 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56617.1_9463 PRW56617 60S ribosomal L36-3-like 0.12 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499503.1_8456 KAA8499503 60S ribosomal protein L36-1 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
InterPro domains Description Start Stop
IPR000509 Ribosomal_L36e 39 133
No external refs found!