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  5. Vocar.0031s0111.1

Vocar.0031s0111.1 (32890039)


Aliases : 32890039

Description : DNA-directed RNA polymerase, RBP11-like dimerisation domain [Interproscan].


Gene families : OG_01_0000820 (OrthoFinder) Phylogenetic Tree(s): OG0000820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0031s0111.1
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cz02g18130.t1 No alias DNA-directed RNA polymerase, RBP11-like dimerisation... 0.09 OrthoFinder
Cz05g13120.t1 No alias DNA-directed RNA polymerase, RBP11-like dimerisation... 0.05 OrthoFinder
Sro1310_g261580.1 Contig1983.g16972 Polymerase II subunit RPB11 0.04 OrthoFinder
Sro656_g182450.1 Contig256.g3156 I and III subunit RPAC2 0.01 OrthoFinder
SymbC1.scaffold513.1 513.1 DNA-directed RNA polymerase, RBP11-like dimerisation... 0.01 OrthoFinder
TP10G01270.1 No alias DNA-directed RNA polymerase, RBP11-like dimerisation... 0.03 OrthoFinder
XM_002503873.1 MICPUN_76999, 76999 DNA-directed RNA polymerase, RBP11-like dimerisation... 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003714 transcription corepressor activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
CC GO:0005779 integral component of peroxisomal membrane IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0016559 peroxisome fission IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0048285 organelle fission IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
MF GO:0140110 transcription regulator activity IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
InterPro domains Description Start Stop
IPR009025 RBP11-like_dimer 11 83
No external refs found!