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  5. Vocar.0031s0002.1

Vocar.0031s0002.1 (32890167)


Aliases : 32890167

Description : Photosystem I PsaH, reaction centre subunit VI [Interproscan].


Gene families : OG_01_0006336 (OrthoFinder) Phylogenetic Tree(s): OG0006336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0031s0002.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cre07.g330250 30775443, PSAH Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.16 OrthoFinder
Cz12g12230.t1 No alias Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.11 OrthoFinder
Dusal.1048s00003.1 33194744 Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.03 OrthoFinder
OT_15G01060.1 No alias Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.08 OrthoFinder
Transcript_contig_61085 61085 Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.03 OrthoFinder
XM_002501497.1 MICPUN_58213, 58213 Photosystem I subunit VI, chloroplast precursor (PSAH) 0.05 OrthoFinder
XM_003057917.1 MicpuC2_70928, 70928 Photosystem I subunit VI, chloroplast precursor (PSAH) 0.07 OrthoFinder
lcl|BLLF01001538.1_cds_GFH19901.1_14378 HaLaN_16930, GFH19901 Photosystem I PsaH, reaction centre subunit VI [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56048.1_10293 PRW56048 Photosystem I reaction center subunit VI-chloroplastic-like 0.1 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009512 cytochrome b6f complex IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0015035 protein-disulfide reductase activity IEP Enrichment
MF GO:0015036 disulfide oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
InterPro domains Description Start Stop
IPR004928 PSI_PsaH 15 125
No external refs found!