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Aliases : 32894566
Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000013 (OrthoFinder) Phylogenetic Tree(s): OG0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0030s0156.1 | |
| Cluster | HCCA: Cluster_108 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz01g23030.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz03g26240.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz04g09210.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz07g02100.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz08g11160.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz09g32070.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz12g16070.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Cz13g03240.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz15g09060.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz15g17110.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| Cz16g14150.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| Dusal.0049s00019.1 | 33200350 | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| PTI_17G00760.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| PTI_20G01950.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
| UNPLg00080.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
| XM_002502003.1 | MICPUN_82194, 82194 | Chlorophyll a/b-binding protein (LHCQ) | 0.02 | OrthoFinder | |
| XM_002505041.1 | MICPUN_104964, 104964 | Chlorophyll a/b-binding protein, psi-associated,... | 0.03 | OrthoFinder | |
| lcl|BLLF01002496.1_cds_GFH24298.1_18775 | HaLaN_22066, GFH24298 | Chlorophyll a-b binding protein, chloroplastic | 0.02 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61161.1_400 | PRW61161 | Chlorophyll a b binding CP29 | 0.03 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61250.1_625 | PRW61250 | Light-harvesting of photosystem I | 0.03 | OrthoFinder | |
| lcl|LHPG02000004.1_cds_PRW59323.1_7029 | PRW59323 | Light-harvesting of photosystem I | 0.04 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW56910.1_9115 | PRW56910 | Light-harvesting of photosystem I | 0.04 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW57230.1_9116 | PRW57230 | Light-harvesting of photosystem I | 0.03 | OrthoFinder | |
| lcl|LHPG02000007.1_cds_PRW57333.1_9090 | PRW57333 | Chlorophyll a b-binding apo CP26 precursor | 0.02 | OrthoFinder | |
| lcl|LHPG02000011.1_cds_PRW45536.1_1258 | PRW45536 | Light-harvesting of photosystem I | 0.03 | OrthoFinder | |
| lcl|LHPG02000011.1_cds_PRW45697.1_1257 | PRW45697 | Light-harvesting of photosystem I | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Enrichment |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Enrichment |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| CC | GO:0005759 | mitochondrial matrix | IEP | Enrichment |
| BP | GO:0006401 | RNA catabolic process | IEP | Enrichment |
| BP | GO:0006402 | mRNA catabolic process | IEP | Enrichment |
| BP | GO:0006553 | lysine metabolic process | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Enrichment |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Enrichment |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009085 | lysine biosynthetic process | IEP | Enrichment |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Enrichment |
| CC | GO:0009523 | photosystem II | IEP | Enrichment |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Enrichment |
| BP | GO:0010035 | response to inorganic substance | IEP | Enrichment |
| BP | GO:0010038 | response to metal ion | IEP | Enrichment |
| BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Enrichment |
| MF | GO:0016209 | antioxidant activity | IEP | Enrichment |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| MF | GO:0016853 | isomerase activity | IEP | Enrichment |
| MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Enrichment |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Enrichment |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Enrichment |
| BP | GO:0042221 | response to chemical | IEP | Enrichment |
| CC | GO:0043233 | organelle lumen | IEP | Enrichment |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Enrichment |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | Enrichment |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Enrichment |
| BP | GO:0048519 | negative regulation of biological process | IEP | Enrichment |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Enrichment |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| BP | GO:0110154 | RNA decapping | IEP | Enrichment |
| BP | GO:0110156 | methylguanosine-cap decapping | IEP | Enrichment |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 51 | 217 |
| No external refs found! |