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  5. Vocar.0030s0111.1

Vocar.0030s0111.1 (32894487)


Aliases : 32894487

Description : Fatty acid desaturase domain; Cytochrome b5-like heme/steroid binding domain [Interproscan].


Gene families : OG_01_0000592 (OrthoFinder) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0030s0111.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001030.9 tig00001030_g6451.t1 Acyl-lipid (8-3)-desaturase OS=Physcomitrella patens... 0.02 OrthoFinder
Dusal.0534s00010.1 33197451 Cytochrome b5-like heme/steroid binding domain; Fatty... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Enrichment
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
BP GO:0006402 mRNA catabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008134 transcription factor binding IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010629 negative regulation of gene expression IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0043085 positive regulation of catalytic activity IEP Enrichment
BP GO:0044093 positive regulation of molecular function IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:0110154 RNA decapping IEP Enrichment
BP GO:0110156 methylguanosine-cap decapping IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 168 439
IPR001199 Cyt_B5-like_heme/steroid-bd 17 74
No external refs found!