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Aliases : 32894420
Description : RAP domain [Interproscan].
Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Vocar.0030s0033.1 | |
| Cluster | HCCA: Cluster_132 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cz04g11280.t1 | No alias | RAP domain [Interproscan]. | 0.03 | OrthoFinder | |
| Cz08g16170.t1 | No alias | Hypothetical protein | 0.02 | OrthoFinder | |
| Cz08g31440.t1 | No alias | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0112s00019.1 | 33195936 | RAP domain [Interproscan]. | 0.02 | OrthoFinder | |
| OT_01G02280.1 | No alias | RAP domain [Interproscan]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| CC | GO:0005892 | acetylcholine-gated channel complex | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006810 | transport | IEP | Enrichment |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Enrichment |
| BP | GO:0016197 | endosomal transport | IEP | Enrichment |
| BP | GO:0016482 | cytosolic transport | IEP | Enrichment |
| MF | GO:0016853 | isomerase activity | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| CC | GO:0034702 | ion channel complex | IEP | Enrichment |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Enrichment |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Enrichment |
| CC | GO:0043235 | receptor complex | IEP | Enrichment |
| BP | GO:0046907 | intracellular transport | IEP | Enrichment |
| BP | GO:0051179 | localization | IEP | Enrichment |
| BP | GO:0051234 | establishment of localization | IEP | Enrichment |
| BP | GO:0051276 | chromosome organization | IEP | Enrichment |
| BP | GO:0051641 | cellular localization | IEP | Enrichment |
| BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
| BP | GO:0071103 | DNA conformation change | IEP | Enrichment |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Enrichment |
| CC | GO:0098802 | plasma membrane signaling receptor complex | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Enrichment |
| CC | GO:1990351 | transporter complex | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013584 | RAP | 1032 | 1076 |
| No external refs found! |