Vocar.0029s0001.1 (32887570)

Aliases : 32887570

Description : SNF2-related, N-terminal domain [Interproscan].

Gene families : OG_01_0001793 (OrthoFinder) Phylogenetic Tree(s): OG0001793_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Vocar.0029s0001.1
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
Dusal.0351s00003.1	33194401	SNF2-related, N-terminal domain [Interproscan].	0.02	OrthoFinder
OT_06G00450.1	No alias	SNF2-related, N-terminal domain [Interproscan].	0.02	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8495896.1_1894	KAA8495896	E3 ubiquitin-protein ligase SHPRH	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000330	SNF2_N	317	566
IPR000330	SNF2_N	903	1007

External Links

No external refs found!