Vocar.0028s0163.1 (32895585)


Aliases : 32895585

Description : ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain [Interproscan].


Gene families : OG_01_0000075 (OrthoFinder) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0028s0163.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021127.121 tig00021127_g18802.t1 ATP-dependent zinc metalloprotease FTSH 5, chloroplastic... 0.02 OrthoFinder
Cre09.g393950 30780473 Probable inactive ATP-dependent zinc metalloprotease... 0.04 OrthoFinder
Cre12.g485800 30791981, FHL1 Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder
Cz02g25060.t1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.02 OrthoFinder
Cz03g27160.t1 No alias ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.03 OrthoFinder
Cz05g27050.t1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.02 OrthoFinder
Dusal.0121s00013.1 33195080 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.05 OrthoFinder
Dusal.1123s00001.1 33193861 ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... 0.04 OrthoFinder
EOD15728 No alias ATP-dependent metalloprotease FtsH [Ensembl]. 0.03 OrthoFinder
OT_09G02820.1 No alias AAA ATPase, AAA+ lid domain; ATPase, AAA-type, core;... 0.02 OrthoFinder
Sro758_g198040.1 Contig434.g5856 Zinc metalloprotease FTSH, chloroplastic 0.02 OrthoFinder
Transcript_contig_364 364 ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54241 54241 Peptidase M41; ATPase, AAA-type, core; AAA ATPase, AAA+... 0.01 OrthoFinder
lcl|BLLF01000045.1_cds_GFH06562.1_1039 HaLaN_01213, GFH06562 Membrane AAA-metalloprotease 0.02 OrthoFinder
lcl|BLLF01003298.1_cds_GFH26952.1_21429 HaLaN_25189, GFH26952 AAA domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60934.1_745 PRW60934 ATP-dependent zinc metalloprotease chloroplastic isoform C 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60287.1_4164 PRW60287 Cell division isoform A 0.02 OrthoFinder
lcl|LHPG02000010.1_cds_PRW51102.1_1065 PRW51102 ATP-dependent zinc metalloprotease FTSH chloroplastic isoform B 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39337.1_2559 PRW39337 ATP-dependent zinc metalloprotease FTSH chloroplastic 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33093.1_3571 PRW33093 Membrane AAA-metalloprotease 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004176 ATP-dependent peptidase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR041569 AAA_lid_3 572 611
IPR003959 ATPase_AAA_core 374 433
No external refs found!