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  5. Vocar.0028s0147.1

Vocar.0028s0147.1 (32895693)


Aliases : 32895693

Description : Trichohyalin-plectin-homology domain [Interproscan].


Gene families : OG_01_0006226 (OrthoFinder) Phylogenetic Tree(s): OG0006226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Vocar.0028s0147.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.9 tig00000093_g3448.t1 No description available 0.03 OrthoFinder
Cre02.g078550 30785213, FAP210 No description available 0.09 OrthoFinder
Cz08g01140.t1 No alias Trichohyalin-plectin-homology domain [Interproscan]. 0.02 OrthoFinder
Dusal.0057s00033.1 33192910 Hypothetical protein 0.03 OrthoFinder
XM_002500481.1 MICPUN_99477, 99477 Trichohyalin-plectin-homology domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01001550.1_cds_GFH19966.1_14443 HaLaN_17009, GFH19966 Hypothetical protein 0.01 OrthoFinder
lcl|BLLF01001550.1_cds_GFH19967.1_14444 HaLaN_17010, GFH19967 Trichohyalin-plectin-homology domain [Interproscan]. 0.04 OrthoFinder
lcl|BLLF01002922.1_cds_GFH25797.1_20274 HaLaN_23823, GFH25797 Trichohyalin-plectin-homology domain [Interproscan]. 0.08 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004725 protein tyrosine phosphatase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006470 protein dephosphorylation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment

No InterPro domains available for this sequence

No external refs found!